STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03598.1Putative polyketide. (185 aa)    
Predicted Functional Partners:
EKF03599.1
SpoVR like family protein; KEGG: rxy:Rxyl_1578 0.994 3-oxoadipate enol-lactonase K01055.
       0.777
EKE97166.1
Hypothetical protein; KEGG: mlo:mlr0839 0.43 DNA topoisomerase I K03168.
  
     0.706
EKE96871.1
Fimbrial assembly protein; KEGG: rme:Rmet_2748 0.044 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; K01719 uroporphyrinogen-III synthase K02496.
  
     0.653
EKF00365.1
Putative protein-synthesizing GTPase; KEGG: syr:SynRCC307_0447 2.3e-74 neutral invertase-like protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.650
EKF00367.1
Putative protein-synthesizing GTPase; KEGG: syr:SynRCC307_0447 6.7e-75 neutral invertase-like protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.642
EKE98414.1
Hypothetical protein; KEGG: eli:ELI_06605 0.052 NADH-quinone oxidoreductase chain M; K00342 NADH dehydrogenase I subunit M; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.637
EKE98778.1
Cytochrome oxidase assembly protein; KEGG: tro:trd_A0395 4.9e-21 protoheme IX farnesyltransferase (heme O synthase) (HemeB farnesyltransferase) K02301; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.619
EKF05237.1
Putative S-layer y domain protein; KEGG: ava:Ava_3135 0.0024 hypothetical protein.
  
     0.616
EKF02693.1
KEGG: sme:SMc01854 0.00048 putative amidase (AMPD protein); K01447 N-acetylmuramoyl-L-alanine amidase.
  
     0.604
EKE98558.1
Hypothetical protein; KEGG: syg:sync_0336 0.86 beta-carotene hydroxylase; K02294 beta-carotene hydroxylase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.597
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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