STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03406.1Hypothetical protein; KEGG: bfo:BRAFLDRAFT_59392 0.17 hypothetical protein; K01195 beta-glucuronidase. (135 aa)    
Predicted Functional Partners:
EKF03405.1
Hypothetical protein; KEGG: spz:M5005_Spy_0130 0.49 ntpF; V-type ATP synthase subunit F K02122; Psort location: Cytoplasmic, score: 8.96.
       0.759
EKF03865.1
Hypothetical protein; KEGG: met:M446_6797 0.77 cytochrome b/b6 domain-containing protein; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.460
EKF03404.1
Hypothetical protein; KEGG: hit:NTHI0738 0.99995 pepE; peptidase E K05995.
       0.421
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.