STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03413.1Tropomyosin-2; KEGG: edi:EDI_309330 0.037 Tropomyosin-2; Psort location: Cytoplasmic, score: 8.96. (1022 aa)    
Predicted Functional Partners:
EKF02422.1
Hypothetical protein; KEGG: ooe:OEOE_1456 0.36 ABC-type sugar transport system, ATPase component; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.757
EKF06088.1
Leucine Rich repeat protein; KEGG: ddi:DDB_0191503 6.4e-83 pats1; hypothetical protein; K08843 leucine-rich repeat kinase 1; Psort location: Extracellular, score: 9.45.
 
     0.752
EKF02777.1
Putative NB-ARC domain regulatory protein; KEGG: sse:Ssed_3202 7.6e-18 erythronolide synthase K10817; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.730
EKE96542.1
Hypothetical protein; KEGG: shl:Shal_3008 1.8e-11 polyketide-type polyunsaturated fatty acid synthase, PfaA.
 
     0.727
EKE96501.1
KEGG: rha:RHA1_ro03019 0.0010 protein kinase/LuxR family transcriptional regulator K08282.
 
     0.705
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
  0.683
EKF00793.1
KEGG: hau:Haur_4088 8.2e-70 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase.
   
   0.665
EKF01799.1
FAD binding domain protein; KEGG: npu:Npun_R2246 6.5e-18 monooxygenase, FAD-binding.
  
     0.635
EKE98673.1
4Fe-4S binding domain protein; KEGG: cco:CCC13826_0991 2.2e-05 CDP-diacylglycerol--serine O-phosphatidyltransferase (phosphatidylserine synthase); Psort location: Cytoplasmic, score: 8.96.
 
    0.631
EKF02421.1
Tetratricopeptide-repeat protein; KEGG: ava:Ava_1552 5.0e-16 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 8.96.
 
     0.620
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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