STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03414.1stearoyl-CoA 9-desaturase; KEGG: ava:Ava_1693 2.0e-155 fatty acid desaturase; K02294 beta-carotene hydroxylase; Psort location: CytoplasmicMembrane, score: 10.00. (299 aa)    
Predicted Functional Partners:
EKF02716.1
Putative dehydrogenase FixC; KEGG: ecb:100062365 0.28 similar to glutathione reductase; K00383 glutathione reductase (NADPH).
     
 0.945
EKF02932.1
Putative beta-carotene-ketolase; KEGG: bra:BRADO6505 6.8e-50 crtW; beta-carotene ketolase (beta-carotene oxygenase) K09836; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.936
EKF05578.1
Putative dehydrogenase; KEGG: cyc:PCC7424_0818 0.00012 2-octaprenyl-6-methoxyphenyl hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase; Psort location: Cytoplasmic, score: 8.96.
     
 0.932
EKE97751.1
FAD dependent oxidoreductase; KEGG: sru:SRU_1502 8.3e-77 crtO; beta-carotene ketolase; Psort location: Cytoplasmic, score: 8.96.
    
 0.930
EKF00995.1
Amine oxidase; KEGG: ava:Ava_0036 3.6e-298 UDP-galactopyranose mutase K01854.
     
 0.902
EKF02181.1
Hypothetical protein; KEGG: mex:Mext_2986 0.98 fatty acid desaturase; K10255 omega-6 fatty acid desaturase (delta-12 desaturase).
  
     0.764
EKF06220.1
Hypothetical protein; KEGG: pto:PTO0609 0.71 cytochrome d ubiquinol oxidase subunit I K00425; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.761
EKF04903.1
Hypothetical protein; KEGG: pde:Pden_2307 0.0014 cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit.
  
     0.753
EKF03890.1
Hypothetical protein; KEGG: chu:CHU_0040 0.00090 ATPase involved in DNA repair K03546.
  
     0.721
EKF06182.1
AbrB family transcriptional regulator; KEGG: bfu:BC1G_02880 0.86 alpha-type of subunit of 20S proteasome; K02731 20S proteasome subunit alpha 4; Psort location: Cytoplasmic, score: 8.96.
  
     0.718
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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