STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03434.1Putative phosphodiesterase I; KEGG: chu:CHU_0744 1.5e-132 CHU large protein K01238; Psort location: Extracellular, score: 10.00. (1757 aa)    
Predicted Functional Partners:
EKF06106.1
5'-nucleotidase protein; KEGG: ava:Ava_3996 3.3e-215 metallophosphoesterase K01081; Psort location: Periplasmic, score: 9.76; Belongs to the 5'-nucleotidase family.
   
 0.960
EKF05317.1
FG-GAP repeat protein; KEGG: ter:Tery_1835 2.8e-19 Peptidyl-Asp metallopeptidase. Metallo peptidase. MEROPS family M72.
 
 
 0.585
EKF04966.1
Hypothetical protein; KEGG: rhi:NGR_c08440 9.2e-94 dTDP-glucose 4,6-dehydratase K07093.
 
   
 0.555
EKF03435.1
Cytochrome P450; KEGG: npu:Npun_R4625 1.2e-192 cytochrome P450; Psort location: CytoplasmicMembrane, score: 8.46.
       0.526
EKF03436.1
Hypothetical protein; KEGG: rcm:A1E_05125 0.99 dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase.
       0.526
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
     
 0.516
EKF06171.1
NHL repeat protein; KEGG: par:Psyc_0852 0.83 gluconolactonase; Psort location: Periplasmic, score: 9.83.
   
 0.491
EKF05611.1
Hypothetical protein; KEGG: pic:PICST_78208 0.83 ACH1; Acetyl-CoA hydrolase (Acetyl-CoA deacylase) (Acetyl-CoA acylase); K01067 acetyl-CoA hydrolase; Psort location: Extracellular, score: 9.64.
   
 0.491
EKF05842.1
S-layer protein; KEGG: ava:Ava_3135 3.6e-28 hypothetical protein.
   
 0.491
EKF04666.1
Hypothetical protein; KEGG: scl:sce8490 2.8e-08 putative dehydrogenase/GMP reductase.
   
 0.491
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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