STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03439.1Hypothetical protein; KEGG: rle:RL0079 0.54 acsAB; putative transmembrane cellulose synthase K00694; Psort location: CytoplasmicMembrane, score: 10.00. (179 aa)    
Predicted Functional Partners:
EKE98865.1
Putative polysaccharide biosynthesis protein; KEGG: pfo:Pfl01_3841 0.00052 phosphoribosylaminoimidazole carboxylase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.534
EKF01857.1
Hypothetical protein; KEGG: mpo:Mpop_3369 0.79 ATP synthase F0, C subunit; K02110 F-type H+-transporting ATPase subunit c; Psort location: Cytoplasmic, score: 8.96.
  
     0.507
EKF05839.1
Hypothetical protein; KEGG: mmc:Mmcs_3093 0.17 lspA; lipoprotein signal peptidase K03101; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.498
EKE98115.1
Putative plasmid recombination protein; KEGG: syf:Synpcc7942_0480 0.16 GAF sensor signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.497
EKE99543.1
Putative plasmid recombination protein; KEGG: azo:azo1200 0.30 xseB; exodeoxyribonuclease VII K03602.
  
     0.496
EKF03999.1
Hypothetical protein; KEGG: sis:LS215_0273 1.1e-05 tyrosine specific protein phosphatase.
  
     0.487
EKF03440.1
Hypothetical protein; KEGG: bvu:BVU_3539 0.25 superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family.
       0.466
EKE98197.1
Integrase; KEGG: yli:YALI0C00891g 0.56 YALI0C00891p; K08286 protein-serine/threonine kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.460
EKE97319.1
Integrase; KEGG: lbc:LACBIDRAFT_324786 0.9999 ornithine acetyltransferase K00620.
  
     0.440
EKF03510.1
Hypothetical protein; KEGG: reu:Reut_A0186 0.89 metX; homoserine O-acetyltransferase K00641.
  
     0.432
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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