STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF03455.1Fe-S metabolism protein SufE; KEGG: eic:NT01EI_0816 1.1e-10 cysteine desulfurase, sulfur acceptor subunit CsdE, putative K02426; Psort location: Cytoplasmic, score: 9.26. (144 aa)    
Predicted Functional Partners:
EKE97176.1
KEGG: npu:Npun_F4825 2.0e-208 SufS subfamily cysteine desulfurase K11717; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.963
EKE99976.1
KEGG: ava:Ava_1826 9.1e-190 cysteine desulphurase-like protein; Psort location: Cytoplasmic, score: 9.97.
 
 0.953
EKF03980.1
Aminotransferase, class V; KEGG: npu:Npun_F1365 7.6e-154 aminotransferase, class V K11325; Psort location: Cytoplasmic, score: 9.97.
  
 0.938
EKE98535.1
Aminotransferase, class V; KEGG: mxa:MXAN_5758 6.9e-121 cefD; isopenicillin N epimerase K04127; Psort location: Cytoplasmic, score: 9.26.
  
 0.938
EKE97174.1
KEGG: ava:Ava_0425 6.4e-125 FeS assembly ATPase SufC K09013.
 
 
 0.887
EKE97173.1
SUF system FeS cluster assembly; KEGG: chu:CHU_2784 0.83 arcB; multi-sensor hybrid histidine kinase K00936.
 
 
 0.758
EKE97175.1
FeS assembly protein SufD; KEGG: sme:SM_b20317 0.52 putative sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein.
 
 
 0.712
EKF03456.1
KEGG: ava:Ava_0013 7.3e-13 alpha/beta hydrolase fold K00433; Psort location: CytoplasmicMembrane, score: 9.82.
       0.694
EKF03670.1
KEGG: npu:Npun_R0672 1.2e-226 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.611
EKF03453.1
Toxin-antitoxin system protein; KEGG: cbl:CLK_0019 0.12 cat; chloramphenicol acetyltransferase.
       0.523
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.