STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03459.1ABC superfamily ATP binding cassette; KEGG: npu:Npun_F3519 0. cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; Psort location: CytoplasmicMembrane, score: 10.00. (904 aa)    
Predicted Functional Partners:
EKF03460.1
Type I secretion membrane fusion protein, HlyD family; KEGG: tet:TTHERM_00656030 2.7e-07 CDP-alcohol phosphatidyltransferase family protein K00994; Psort location: CytoplasmicMembrane, score: 9.82.
 
   0.930
EKF03458.1
Putative transposase; KEGG: mgi:Mflv_2888 0.86 protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 8.96.
 
     0.871
EKF01861.1
Type I secretion membrane fusion protein, HlyD family; KEGG: dme:Dmel_CG15792 1.8e-06 zip; zipper K10352; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.852
EKF03461.1
Hypothetical protein; KEGG: reh:H16_A2685 4.2e-18 parvulin-like peptidyl-prolyl isomerase K01802; Psort location: Cytoplasmic, score: 8.96.
 
     0.847
EKF01738.1
Type I secretion membrane fusion protein, HlyD family; KEGG: npu:Npun_F2138 3.5e-07 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.741
EKF01860.1
KEGG: reh:H16_A2685 1.4e-17 parvulin-like peptidyl-prolyl isomerase K01802; Psort location: Cytoplasmic, score: 8.96.
  
     0.718
EKF05353.1
KEGG: npu:Npun_F2138 3.9e-09 cyclic nucleotide modulated ABC exporter membrane fusion protein.
  
   0.696
EKE99719.1
Type I secretion membrane fusion protein, HlyD family; KEGG: ava:Ava_4846 1.1e-05 lipopolysaccharide biosynthesis K00903.
  
   0.683
EKE99639.1
Secretion protein, HlyD family; KEGG: npu:Npun_F2138 4.2e-08 cyclic nucleotide modulated ABC exporter membrane fusion protein.
  
   0.659
EKF06082.1
KEGG: npu:Npun_F2138 1.8e-05 cyclic nucleotide modulated ABC exporter membrane fusion protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
   0.657
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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