STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03465.1WD domain, G-beta repeat protein; KEGG: afm:AFUA_7G07100 2.0e-22 Pfs, NACHT and WD domain protein K00777. (347 aa)    
Predicted Functional Partners:
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
    
  0.802
EKF01001.1
Hypothetical protein; KEGG: cgt:cgR_1633 0.080 phosphoenolpyruvate carboxylase K01595.
    
  0.802
EKE98023.1
WD domain, G-beta repeat protein; KEGG: ava:Ava_4855 1.6e-19 WD-40 repeat-containing serine/threonin protein kinase K00908.
  
  
  0.794
EKF04129.1
WD domain, G-beta repeat protein; KEGG: ava:Ava_4855 1.4e-21 WD-40 repeat-containing serine/threonin protein kinase K00908.
  
     0.765
EKE97214.1
Putative WD-40 repeat protein; KEGG: scl:sce4552 6.7e-66 protein kinase.
  
     0.756
EKF01304.1
Helicase; KEGG: lsp:Bsph_0793 1.9e-08 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
    
  0.756
EKE99956.1
WD domain, G-beta repeat protein; KEGG: ava:Ava_2851 2.7e-13 WD-40 repeat-containing serine/threonin protein kinase K00908.
  
     0.750
EKF00473.1
WD domain, G-beta repeat protein; KEGG: scl:sce4552 7.7e-151 protein kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.749
EKF03314.1
Hypothetical protein; KEGG: cja:CJA_0651 0.044 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96.
    
  0.682
EKE99592.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
  0.679
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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