STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03346.1Phycocyanin alpha subunit; KEGG: rpf:Rpic12D_1629 0.54 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455. (163 aa)    
Predicted Functional Partners:
EKF03349.1
Phycobilisome rod-core linker; KEGG: ctc:CTC00194 0.084 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Belongs to the phycobilisome linker protein family.
 
 
 
 0.977
EKF02358.1
Phycobilisome linker protein ApcE; KEGG: cak:Caul_4567 0.96 truA; tRNA pseudouridine synthase A K06173; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the phycobilisome linker protein family.
  
 
 
 0.975
EKF02362.1
Allophycocyanin-associated protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.975
EKF00957.1
Phycobilisome linker polypeptide protein; KEGG: bxe:Bxe_A0988 0.93 ADP-glyceromanno-heptose 6-epimerase precursor K03274; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
  
 
 
 0.974
EKF02378.1
Phycocyanin beta subunit; KEGG: sil:SPO0923 0.37 carB; carbamoyl phosphate synthase large subunit K01955.
 
 
 
 0.954
EKF00109.1
Phycobilisome rod-core linker protein; KEGG: cpf:CPF_0460 0.40 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family.
  
 
 
 0.954
EKF03347.1
Phycobilisome rod-core linker protein; KEGG: dme:Dmel_CG14529 0.82 CG14529 gene product from transcript CG14529-RA; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
 
 
 
 0.944
EKF02373.1
Phycocyanin-associated protein; KEGG: aae:aq_642 0.86 RNA 3'-terminal-phosphate cyclase K01974; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
 
 
 
 0.944
EKF02374.1
Phycocyanin-associated protein; KEGG: cyn:Cyan7425_5047 0.18 oxidoreductase FAD/NAD(P)-binding domain protein; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
 
 
 
 0.944
EKF01401.1
Phycoerythrocyanin-associated protein; KEGG: cli:Clim_0029 0.34 F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
 
 
 
 0.944
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.