STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03350.1Hypothetical protein; KEGG: ava:Ava_0501 0.83 histidine kinase K00936. (58 aa)    
Predicted Functional Partners:
EKF03349.1
Phycobilisome rod-core linker; KEGG: ctc:CTC00194 0.084 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Belongs to the phycobilisome linker protein family.
       0.773
EKF03351.1
Phycocyanin-associated protein; KEGG: cyp:PCC8801_2543 4.1e-11 oxidoreductase FAD/NAD(P)-binding domain protein; K02641 ferredoxin--NADP+ reductase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.686
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.