STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03376.1Putative ThiF/MoeB/HesA family protein; KEGG: hma:rrnAC2696 0.038 serA1; D-3-phosphoglycerate dehydrogenase K00058; Psort location: Cytoplasmic, score: 8.96. (391 aa)    
Predicted Functional Partners:
EKF03375.1
Hypothetical protein; KEGG: cpb:Cphamn1_0100 0.998 ATP-dependent metalloprotease FtsH K03798.
       0.802
EKF03377.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.802
rtcA
RNA 3'-terminal-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.
   
    0.619
EKF03373.1
Putative toxin-antitoxin system, toxin component; KEGG: bmf:BAB1_0270 4.3e-09 zinc-dependent metallopeptidase K01417; Psort location: Cytoplasmic, score: 8.96.
       0.555
thiG
Glycine oxidase ThiO; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.548
EKF03374.1
Putative Xre family transcrptional regulator; KEGG: cja:CJA_3717 0.00067 dam; adenine-specific DNA methyltransferase.
       0.519
EKF03372.1
Hypothetical protein; KEGG: chu:CHU_2979 2.3e-15 TPR repeat-containing protein K06026; Psort location: CytoplasmicMembrane, score: 9.82.
       0.494
EKF03455.1
Fe-S metabolism protein SufE; KEGG: eic:NT01EI_0816 1.1e-10 cysteine desulfurase, sulfur acceptor subunit CsdE, putative K02426; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.430
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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