STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03315.1KEGG: vvi:100256517 0.92 hypothetical protein LOC100256517; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase. (64 aa)    
Predicted Functional Partners:
EKF03314.1
Hypothetical protein; KEGG: cja:CJA_0651 0.044 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96.
       0.586
EKF03312.1
Hypothetical protein; KEGG: vvu:VV2_0493 0.48 NAD-dependent aldehyde dehydrogenase; K00140 methylmalonate-semialdehyde dehydrogenase.
       0.504
EKF03313.1
Hypothetical protein.
       0.504
EKF03316.1
Hypothetical protein; KEGG: bpm:BURPS1710b_A1131 0.998 UDP-N-acetylglucosamine 2-epimerase K01791.
       0.486
EKF03317.1
Hypothetical protein; KEGG: rsd:TGRD_692 0.25 cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase.
       0.417
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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