STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03319.1S23 ribosomal protein; KEGG: rrs:RoseRS_4428 3.7e-07 glutamine--scyllo-inositol transaminase. (121 aa)    
Predicted Functional Partners:
EKF02525.1
S23 ribosomal protein; KEGG: aps:CFPG_165 0.075 gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase.
  
     0.772
EKE97572.1
Putative type IV fimbrial assembly protein PilC; KEGG: cno:NT01CX_1642 0.053 atpI; V-type ATP synthase subunit I K02123; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.745
EKF03961.1
Hypothetical protein; KEGG: syx:SynWH7803_0238 0.97 kpsF; polysialic acid capsule expression protein; K06041 arabinose-5-phosphate isomerase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.707
EKE97570.1
KEGG: pen:PSEEN2333 7.1e-87 XcpR-2; type II secretion pathway protein E K02454; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.707
EKF00134.1
Putative 23S ribosomal protein; KEGG: sep:SE1022 0.98 LexA repressor; K01356 repressor LexA.
  
     0.696
EKF03320.1
Hypothetical protein; KEGG: dmo:Dmoj_GI15585 0.38 GI15585 gene product from transcript GI15585-RA; K00681 gamma-glutamyltranspeptidase.
       0.655
EKF03318.1
Hypothetical protein; KEGG: tma:TM0478 0.51 tyrosyl-tRNA synthetase K01866; Psort location: Cytoplasmic, score: 8.96.
       0.642
EKF03317.1
Hypothetical protein; KEGG: rsd:TGRD_692 0.25 cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase.
       0.567
EKE97040.1
Putative DNA internalization competence protein ComEC/Rec2; KEGG: stp:Strop_2269 0.027 apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.543
EKF03316.1
Hypothetical protein; KEGG: bpm:BURPS1710b_A1131 0.998 UDP-N-acetylglucosamine 2-epimerase K01791.
       0.482
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.