STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03235.1Hypothetical protein; KEGG: fps:FP0246 9.6e-21 type II endonuclease-methyltransferasefusion protein; Psort location: Cytoplasmic, score: 8.96. (1293 aa)    
Predicted Functional Partners:
EKF03233.1
DEAD/DEAH box family helicase; KEGG: nph:NP3876A 8.2e-173 helicase; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.923
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.913
EKF03310.1
Hypothetical protein; KEGG: nph:NP3876A 3.3e-12 helicase.
 
     0.772
EKF03234.1
Hypothetical protein; KEGG: abm:ABSDF2686 0.24 metG; methionyl-tRNA synthetase K01874; Psort location: Cytoplasmic, score: 8.96.
       0.732
EKF05537.1
SNF2 family helicase; KEGG: hsl:OE8016F 7.2e-28 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
 
     0.663
EKF04456.1
DEAD/DEAH box family helicase; KEGG: hwa:HQ3274A 5.2e-75 helicase K01529; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.581
EKF06202.1
Hypothetical protein; KEGG: sca:Sca_0957 0.87 glnA; glutamine synthetase K01915; Psort location: Cytoplasmic, score: 8.96.
  
     0.578
rsmI
TIGR00096 protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.506
EKE96690.1
DEAD/DEAH box helicase; KEGG: dat:HRM2_14650 1.0e-104 dbp; Dbp; Psort location: CytoplasmicMembrane, score: 9.27.
 
     0.467
EKF06199.1
Hypothetical protein; KEGG: hiq:CGSHiGG_00145 0.26 pyruvate kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.441
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.