STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03266.1Hypothetical protein; KEGG: cgt:cgR_2110 0.56 galactokinase; K00849 galactokinase. (118 aa)    
Predicted Functional Partners:
EKF03267.1
Hypothetical protein; KEGG: syd:Syncc9605_1367 0.76 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Cytoplasmic, score: 8.96.
       0.783
EKF03268.1
KEGG: pho:PH0274 0.44 hypothetical protein; K07588 LAO/AO transport system kinase; Psort location: Cytoplasmic, score: 8.96.
       0.757
EKF03269.1
Hypothetical protein; KEGG: kcr:Kcr_0156 0.037 orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase.
       0.757
EKF03270.1
Endonuclease/exonuclease/phosphatase family protein; KEGG: scl:sce0152 2.4e-86 polynucleotide adenyltransferase.
       0.507
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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