STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03273.1KEGG: bra:BRADO5577 0.021 putative acetyltransferase family protein;K00657. (82 aa)    
Predicted Functional Partners:
EKF03272.1
Hypothetical protein; KEGG: cco:CCC13826_1777 0.9999 fliI; flagellum-specific ATP synthase K02412.
     0.913
EKE97243.1
Hypothetical protein; KEGG: tan:TA18040 0.36 DNA-directed RNA polymerase iii K03021.
 
     0.822
EKF01383.1
Putative IS4 family transposase; KEGG: hmo:HM1_1923 0.89 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase, putative; K03856 3-deoxy-7-phosphoheptulonate synthase.
 
     0.784
EKF05808.1
Hypothetical protein; KEGG: osa:4335977 0.61 Os04g0447800; hypothetical protein; K01580 glutamate decarboxylase.
  
     0.775
EKF01382.1
Hypothetical protein; KEGG: mfe:Mefer_0896 0.22 DNA methylase N-4/N-6 domain protein; K07319 putative adenine-specific DNA-methyltransferase.
  
     0.775
EKE97679.1
Hypothetical protein; KEGG: nha:Nham_4600 2.6e-05 feruloyl esterase.
  
     0.486
EKF02620.1
Transposase; KEGG: nha:Nham_4600 6.7e-17 feruloyl esterase.
  
     0.485
EKF04343.1
IS66 transposase; KEGG: pic:PICST_61628 0.72 MGS1; DNA-dependent ATPase MGS1 (Maintenance of genome stability protein 1) DNA-directed DNA polymerase ATPase K07478; Psort location: Cytoplasmic, score: 8.96.
  
     0.453
EKF03583.1
Transposase; KEGG: stp:Strop_3152 0.997 RNA polymerase factor sigma-70 K03088; Psort location: Cytoplasmic, score: 8.96.
  
     0.419
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.