STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03281.1Cobalamin biosynthesis protein; KEGG: reh:H16_A3373 4.9e-40 G3E family GTPase; Psort location: Cytoplasmic, score: 8.96. (351 aa)    
Predicted Functional Partners:
EKF03280.1
Hypothetical protein; KEGG: kse:Ksed_10630 0.058 fumarylacetoacetate hydrolase; K01555 fumarylacetoacetase.
       0.773
rpmB
Ribosomal protein L28; KEGG: bce:BC3926 0.95 ATP-dependent protease La K07177; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.755
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.747
EKE98732.1
KEGG: ava:Ava_1167 0. cobN; cobaltochelatase subunit CobN K02230; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.720
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
 
 0.657
map-2
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
    
 
 0.657
EKF03278.1
Hypothetical protein; KEGG: mrd:Mrad2831_0572 0.993 DNA primase; K02316 DNA primase.
       0.651
EKF03279.1
Hypothetical protein; KEGG: mvn:Mevan_0799 0.86 chromatin associated protein KTI12; K10837 O-phosphoseryl-tRNA(Sec) kinase.
       0.651
EKF03130.1
KEGG: npu:Npun_R3284 3.3e-176 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595.
 
   
 0.614
EKE99080.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_R5107 2.6e-144 ABC transporter related K01990; Psort location: Cytoplasmic, score: 9.12.
     
  0.603
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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