STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03294.1Hypothetical protein; KEGG: bmj:BMULJ_04208 0.022 2,4-dihydroxyacetophenone dioxygenase; Psort location: Cytoplasmic, score: 8.96. (206 aa)    
Predicted Functional Partners:
EKF03295.1
KEGG: reh:H16_A2923 3.8e-17 rpoE4; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K03088; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 
 0.951
EKF03293.1
Hypothetical protein; KEGG: ava:Ava_1610 0.82 amino acid adenylation.
       0.773
EKE98637.1
Hypothetical protein; KEGG: dme:Dmel_CG12781 1.3e-39 nahoda; CG12781 gene product from transcript CG12781-RA K00503.
   
 
 0.719
EKF06130.1
KEGG: reh:H16_A2563 2.9e-19 rpoE1; RNA polymerase sigma factor RpoE K03088; Psort location: Cytoplasmic, score: 9.26; Belongs to the sigma-70 factor family. ECF subfamily.
   
 
 0.718
EKE96337.1
Hypothetical protein; KEGG: dtu:Dtur_1513 0.039 MazG family protein; K02428 nucleoside-triphosphate pyrophosphatase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.718
EKE98368.1
KEGG: reh:H16_A2563 1.3e-23 rpoE1; RNA polymerase sigma factor RpoE K03088; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family. ECF subfamily.
   
 
 0.718
EKF04848.1
Hypothetical protein; KEGG: rci:RCIX1968 0.999 ATP-dependent DNA ligase; K01971 DNA ligase (ATP).
   
 
 0.615
EKE96904.1
Hypothetical protein; KEGG: sss:SSUSC84_1438 0.96 sensor histidine kinase protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.615
EKF02244.1
Hypothetical protein; KEGG: xom:XOO_0167 0.99 truncated 5-keto-4-deoxyuronate isomerase; K01815 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase.
   
 
 0.615
EKF02245.1
Hypothetical protein; KEGG: pmr:PMI2310 0.17 ptrA; protease III precursor K01407.
   
 
 0.615
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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