STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04146.1Hypothetical protein; KEGG: fba:FIC_02041 0.9999 5-formyltetrahydrofolate cyclo-ligase. (40 aa)    
Predicted Functional Partners:
EKF04144.1
PDZ domain protein; KEGG: azo:azo0092 2.0e-34 mucD1; serine protease MucD K01362; Psort location: Periplasmic, score: 9.44.
       0.548
EKF04145.1
Response regulator; KEGG: npu:Npun_F1776 2.3e-19 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
       0.548
EKF04143.1
PDZ domain protein; KEGG: mxa:MXAN_0296 3.8e-49 S1C family peptidase K01362; Psort location: Periplasmic, score: 9.44.
       0.480
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.