STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF04011.1Transglutaminase-like family protein; KEGG: esi:Exig_2078 0.89 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566; Psort location: Cytoplasmic, score: 8.96. (561 aa)    
Predicted Functional Partners:
EKF02814.1
Hypothetical protein; KEGG: bln:Blon_2042 0.073 ATPase associated with various cellular activities, AAA_3; K03924 MoxR-like ATPase.
 
  
  0.827
EKF03484.1
HAS barrel domain protein; KEGG: rxy:Rxyl_2982 0.71 multi-sensor signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.766
EKE99345.1
Hypothetical protein; KEGG: pfo:Pfl01_0340 0.35 signal transduction histidine kinase, nitrogen specific, NtrB K07708.
  
     0.763
EKF00124.1
Hypothetical protein; KEGG: cag:Cagg_0115 2.1e-05 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: OuterMembrane, score: 9.49.
  
     0.752
EKF03477.1
Putative amidinotransferase; KEGG: hma:rrnAC0132 2.7e-87 lysine-ketoglutarate reductase/saccharopine dehydrogenase K00293; Psort location: Cytoplasmic, score: 8.96.
  
     0.744
EKF02358.1
Phycobilisome linker protein ApcE; KEGG: cak:Caul_4567 0.96 truA; tRNA pseudouridine synthase A K06173; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the phycobilisome linker protein family.
  
     0.738
EKF02989.1
Tetratricopeptide repeat protein; KEGG: hpp:HPP12_0003 0.15 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase).
  
     0.725
EKF01152.1
Hypothetical protein; KEGG: lsl:LSL_0649 0.993 def; peptide deformylase K01462.
  
     0.719
EKF03499.1
Hypothetical protein; KEGG: mei:Msip34_0490 0.00030 carbonate dehydratase.
  
     0.710
EKF03796.1
Hypothetical protein; KEGG: dme:Dmel_CG11430 0.65 olf186-F; CG11430 gene product from transcript CG11430-RB.
  
     0.684
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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