STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03996.1Heterocyst differentiation protein; KEGG: pcu:pc0008 0.91 recC; putative exodeoxyribonuclease V gamma chain; K03583 exodeoxyribonuclease V gamma subunit; overlaps another CDS with the same product name. (138 aa)    
Predicted Functional Partners:
EKF03995.1
Heterocyst differentiation protein; KEGG: vsa:VSAL_I2821 0.55 ndh; NADH dehydrogenase K03885; overlaps another CDS with the same product name.
 
     0.946
EKF00735.1
Heterocyst differentiation protein; KEGG: vpa:VPA1123 0.076 putative acyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase.
 
   
 0.808
EKE99395.1
Heterocyst differentiation; KEGG: api:100169608 0.13 similar to helicase; K11665 DNA helicase INO80; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.808
EKF04410.1
Heterocyst differentiation protein XisI; KEGG: aci:ACIAD0226 0.030 putative lysozyme K07273.
 
   
 0.800
EKF03401.1
Heterocyst differentiation protein; KEGG: mmu:12567 0.29 Cdk4; cyclin-dependent kinase 4 K02089; overlaps another CDS with the same product name.
 
   
 0.800
EKE96329.1
Heterocyst differentiation protein; KEGG: reu:Reut_B4751 0.93 taurine dioxygenase K03119; overlaps another CDS with the same product name.
 
   
 0.800
EKF02875.1
XisI protein; KEGG: fth:FTH_0710 0.69 glycosyltransferase K00754.
 
   
 0.800
EKF00419.1
Putative heterocyst differentiation protein; KEGG: tde:TDE0689 0.21 mtnK, ykrT; methylthioribose kinase K00899.
 
     0.790
EKF04425.1
Heterocyst differentiation protein XisI; KEGG: ate:Athe_0081 0.96 PAS/PAC sensor signal transduction histidine kinase K07652.
 
     0.776
EKF03015.1
Heterocyst differentiation protein; KEGG: sai:Saci_1576 0.90 hisA; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814.
 
     0.776
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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