STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03906.1Hypothetical protein; KEGG: tva:TVAG_387410 4.4e-08 viral A-type inclusion protein; K02331 DNA polymerase phi subunit. (678 aa)    
Predicted Functional Partners:
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
    
   0.822
EKE97095.1
Integrase; KEGG: sme:SMc00710 0.31 hisC1; histidinol-phosphate aminotransferase K00817; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.819
EKE97114.1
Putative XRE family protein.
    
   0.767
EKE97093.1
Hypothetical protein; KEGG: mmb:Mmol_2320 0.67 primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase).
    
   0.767
EKE97094.1
Hypothetical protein; KEGG: tpe:Tpen_0304 0.00015 AAA family ATPase, CDC48 subfamily protein K06027; Psort location: Cytoplasmic, score: 8.96.
    
   0.731
EKF04001.1
Putative integrase; KEGG: dme:Dmel_CG17927 0.026 Mhc; Myosin heavy chain K10352; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.690
EKF03927.1
Hypothetical protein; KEGG: ype:YPO3689 0.18 putative ribonuclease; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.690
EKE97115.1
Hypothetical protein; KEGG: tdn:Suden_0858 0.80 polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase.
    
   0.599
EKF03905.1
Hypothetical protein; KEGG: dha:DEHA0E06149g 0.9997 hypothetical protein; K00784 ribonuclease Z.
       0.584
EKF03904.1
Hypothetical protein; KEGG: tsi:TSIB_1349 0.40 probable exosome complex exonuclease 1 K11600.
       0.401
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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