STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03914.1Tetratricopeptide repeat protein; KEGG: pmf:P9303_01941 1.8e-49 Tfp pilus assembly protein PilF; K00870 protein kinase. (268 aa)    
Predicted Functional Partners:
EKF00403.1
Putative heat shock protein DnaJ; KEGG: ava:Ava_4855 2.0e-57 WD-40 repeat-containing serine/threonin protein kinase K00908; Psort location: CytoplasmicMembrane, score: 9.50.
    
  0.802
EKF04570.1
Putative heat shock protein 70 DnaK; KEGG: ava:Ava_0434 2.4e-54 serine/threonine protein kinase K00908; Psort location: Cytoplasmic, score: 9.97; Belongs to the heat shock protein 70 family.
    
  0.796
EKF00146.1
Tetratricopeptide repeat protein; KEGG: bmy:Bm1_01735 3.7e-11 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; K09667 polypeptide N-acetylglucosaminyltransferase.
  
  
  0.790
EKF01145.1
KEGG: cyb:CYB_1515 9.8e-12 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
  
 
   0.780
EKF03913.1
Hypothetical protein; KEGG: npu:Npun_F3519 0.00036 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter.
       0.773
EKE99305.1
Tetratricopeptide repeat protein; KEGG: rba:RB12434 4.1e-15 ogt; O-GlcNAc transferase K00754.
  
     0.773
EKF01692.1
Tetratricopeptide repeat protein; KEGG: nve:NEMVE_v1g239520 9.0e-23 hypothetical protein; K09667 polypeptide N-acetylglucosaminyltransferase.
  
     0.772
ruvB
DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.727
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
    
  0.704
EKF01001.1
Hypothetical protein; KEGG: cgt:cgR_1633 0.080 phosphoenolpyruvate carboxylase K01595.
    
  0.704
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.