STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03846.1Arginase; KEGG: npu:Npun_R6035 9.5e-163 arginase/agmatinase/formiminoglutamase K01480; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family. (345 aa)    
Predicted Functional Partners:
speA
Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
  
 
 0.966
speE
Spermine/spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
     
  0.900
leuS
leucine--tRNA ligase; KEGG: npu:Npun_F4156 0. leucyl-tRNA synthetase K01869; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.760
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.747
EKF00957.1
Phycobilisome linker polypeptide protein; KEGG: bxe:Bxe_A0988 0.93 ADP-glyceromanno-heptose 6-epimerase precursor K03274; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the phycobilisome linker protein family.
    
 0.747
EKF00109.1
Phycobilisome rod-core linker protein; KEGG: cpf:CPF_0460 0.40 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the phycobilisome linker protein family.
    
 0.747
EKE99680.1
Putative type II citrate synthase; KEGG: ava:Ava_2713 1.2e-187 citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.737
EKF04985.1
Putative pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.736
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.706
EKF00973.1
Putative delta-1-pyrroline-5-carboxylate dehydrogenase; KEGG: ana:alr0540 0. 1-pyrroline-5 carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase K00318; Psort location: Cytoplasmic, score: 9.97; Belongs to the aldehyde dehydrogenase family.
  
 
 0.703
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.