STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03855.1Pin family recombinase; KEGG: afr:AFE_0019 0.32 def-2; polypeptide deformylase K01462; Psort location: Cytoplasmic, score: 8.96. (438 aa)    
Predicted Functional Partners:
EKF02736.1
Hypothetical protein; KEGG: rha:RHA1_ro04292 0.63 asd; aspartate-semialdehyde dehydrogenase K00133; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.769
EKF00521.1
Hypothetical protein; KEGG: tle:Tlet_1093 0.992 beta-lactamase domain-containing protein; K00784 ribonuclease Z.
  
     0.764
EKF03659.1
Hypothetical protein; KEGG: dme:Dmel_CG5482 0.10 CG5482 gene product from transcript CG5482-RA K09574.
  
     0.756
EKF00154.1
Hypothetical protein; KEGG: npu:Npun_R4932 1.4e-10 light-independent protochlorophyllide reductase, B subunit K04039.
  
     0.756
EKF06188.1
Hypothetical protein; KEGG: rha:RHA1_ro02535 0.77 rubA; alkene monooxygenase rubredoxin K00496; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.750
EKF05046.1
Hypothetical protein; KEGG: fma:FMG_1196 0.45 holo-[acyl-carrier protein] synthase; K00997 holo-[acyl-carrier protein] synthase.
  
     0.746
EKF05232.1
Hypothetical protein; KEGG: dma:DMR_18050 0.016 magnesium-transporting ATPase P-type; K01531 Mg2+-importing ATPase.
  
     0.739
EKF05564.1
Chemotaxis protein; KEGG: pfs:PFLU4733 0.00095 chemotaxis protein K03415.
  
     0.732
EKE97673.1
Hypothetical protein; KEGG: tme:Tmel_1418 0.15 uracil phosphoribosyltransferase K02825.
  
     0.731
EKF02674.1
Hypothetical protein; KEGG: sia:M1425_2592 0.42 agmatinase; K01480 agmatinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.728
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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