STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03868.1WD domain, G-beta repeat protein; KEGG: ava:Ava_4855 9.8e-58 WD-40 repeat-containing serine/threonin protein kinase K00908; Psort location: Extracellular, score: 9.64. (350 aa)    
Predicted Functional Partners:
EKE96564.1
KEGG: scl:sce5991 1.7e-48 protein kinase; Psort location: Cytoplasmic, score: 8.96.
 
     0.956
EKF03236.1
Putative helicase; KEGG: hsl:OE8016F 8.1e-51 ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
    
  0.802
EKF01001.1
Hypothetical protein; KEGG: cgt:cgR_1633 0.080 phosphoenolpyruvate carboxylase K01595.
    
  0.802
EKE99703.1
Putative WD-repeat plasmid protein; KEGG: rha:RHA1_ro10389 0.00011 protein kinase/LuxR family transcriptional regulator K08282.
 
   
  0.785
EKF01304.1
Helicase; KEGG: lsp:Bsph_0793 1.9e-08 ATP-dependent helicase YqhH; Psort location: Cytoplasmic, score: 8.96.
    
  0.756
EKF02726.1
Hypothetical protein; KEGG: ote:Oter_0231 0.36 DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta'; Psort location: Cytoplasmic, score: 8.96.
 
      0.728
EKF03314.1
Hypothetical protein; KEGG: cja:CJA_0651 0.044 hemA; glutamyl-tRNA reductase K02492; Psort location: Cytoplasmic, score: 8.96.
    
  0.682
EKE99592.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
  0.679
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
  0.675
EKE97789.1
Putative beta-lactamase-fold exonuclease; KEGG: dme:Dmel_CG1972 6.4e-13 CG1972 gene product from transcript CG1972-RA; Psort location: Cytoplasmic, score: 8.96.
    
  0.666
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.