STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03879.1FAH family protein; KEGG: ava:Ava_2073 2.5e-123 fumarylacetoacetate (FAA) hydrolase. (257 aa)    
Predicted Functional Partners:
EKE98633.1
Hypothetical protein; KEGG: cyb:CYB_0241 4.1e-19 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K00001 alcohol dehydrogenase K04072.
  
 
 0.735
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.613
EKF04126.1
Morphoprotein, BolA family; KEGG: hip:CGSHiEE_06655 2.4e-08 ligA; NAD-dependent DNA ligase LigA; Belongs to the BolA/IbaG family.
    
   0.597
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.583
EKF02499.1
Hypothetical protein; KEGG: fba:FIC_02097 4.9e-07 catalase.
    
   0.497
EKF01910.1
Putative 4-aminobutyrate transaminase; KEGG: npu:Npun_F1941 4.0e-196 aminotransferase class-III; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.495
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
     
 0.452
EKE99981.1
KEGG: hau:Haur_2764 2.2e-115 4-hydroxyphenylpyruvate dioxygenase K00457; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.441
EKF05033.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.417
EKE98573.1
Riboflavin biosynthesis protein RibD protein; KEGG: ana:all4103 6.4e-86 ribG; riboflavin-specific deaminase; K00082 5-amino-6-(5-phosphoribosylamino)uracil reductase.
    
   0.414
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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