STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKF03882.1KEGG: cyh:Cyan8802_1592 8.2e-07 anti-sigma-factor antagonist and sugar transfersase. (117 aa)    
Predicted Functional Partners:
EKF00986.1
Anti-sigma regulatory factor; KEGG: scl:sce3610 6.7e-20 rsbX1; phosphoserine phosphatase.
  
 
 0.950
EKE98428.1
Sensor histidine kinase; KEGG: ava:Ava_1564 3.7e-276 multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.861
EKE99368.1
Sensor histidine kinase; KEGG: ava:Ava_1564 0. multi-sensor hybrid histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.861
EKF05262.1
ABC superfamily ATP binding protein; KEGG: cco:CCC13826_0092 1.3e-21 MTA/SAH nucleosidase K02066; Belongs to the MlaE permease family.
   
 0.834
EKF03895.1
Hypothetical protein; KEGG: cco:CCC13826_0092 1.3e-30 MTA/SAH nucleosidase K02066; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MlaE permease family.
   
 0.834
EKF04830.1
Response regulator; KEGG: ava:Ava_4779 0. multi-sensor hybrid histidine kinase K00936.
  
  
 0.830
EKF00985.1
KEGG: afw:Anae109_0803 3.5e-156 histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.812
EKE96600.1
Anti-sigma regulatory factor; KEGG: ava:Ava_0663 5.2e-68 putative anti-sigma regulatory factor (Ser/Thr protein kinase); K04757 anti-sigma B factor.
  
   0.792
EKF06190.1
Anti-sigma regulatory factor; KEGG: ana:alr3423 3.6e-60 hypothetical protein; K04757 anti-sigma B factor; Psort location: Cytoplasmic, score: 8.96.
  
   0.784
EKE97122.1
Stage II sporulation protein E; KEGG: npu:Npun_F0082 1.3e-229 serine phosphatase K07315.
 
   0.756
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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