Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKE98992.1Hypothetical protein; KEGG: cts:Ctha_0242 0.993 lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II. (39 aa)    
Predicted Functional Partners:
EKE98990.1
SPFH domain / Band 7 family protein; KEGG: pen:PSEEN2689 1.3e-08 hypothetical protein; K04087 membrane protease subunit HflC; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
EKE98991.1
Hypothetical protein; KEGG: ilo:IL0023 0.15 hemF; coproporphyrinogen III oxidase K00228.
       0.773
EKE98989.1
Hypothetical protein; KEGG: cph:Cpha266_2149 0.91 6-phosphogluconolactonase K01057.
       0.560
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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