STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99004.1Putative membrane protein; KEGG: sfu:Sfum_0205 0.0069 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH dehydrogenase I subunit J; Psort location: CytoplasmicMembrane, score: 10.00. (89 aa)    
Predicted Functional Partners:
EKF04732.1
Hypothetical protein; KEGG: sce:YKR079C 0.16 TRZ1; Trz1p; K00784 ribonuclease Z.
   
    0.418
EKE98987.1
Putative methyltransferase; KEGG: pmr:PMI0728 0.996 cat; chloramphenicol acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
   
    0.418
EKF01830.1
Putative methyltransferase; KEGG: hwa:HQ1999A 0.28 dehydrogenase K00540; Psort location: Cytoplasmic, score: 8.96.
   
    0.418
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.