STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99072.1Hypothetical protein; KEGG: pub:SAR11_0539 0.058 rfaE; cytidylyltransferase/carbohydrate (or pyrimidine) kinase K03272. (555 aa)    
Predicted Functional Partners:
EKE99475.1
Hypothetical protein; KEGG: edi:EDI_048910 0.00054 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
     0.466
EKE99888.1
KEGG: hmo:HM1_3070 4.0e-51 hsdR; type I site-specific deoxyribonuclease, HsdR family; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.450
EKE99073.1
PIN domain protein; KEGG: cyn:Cyan7425_3308 0.94 pantetheine-phosphate adenylyltransferase K00954.
       0.433
EKE99074.1
Hypothetical protein; KEGG: ckl:CKL_1326 0.23 Holliday junction resolvase-like protein K07447.
       0.433
EKF05527.1
Type I site-specific deoxyribonuclease restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
   0.415
EKF05079.1
GMP synthase; KEGG: ava:Ava_1294 0. glutamate synthase (ferredoxin) K00284.
     
 0.409
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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