STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99124.1Hypothetical protein; KEGG: fra:Francci3_1462 0.31 CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 9.82. (70 aa)    
Predicted Functional Partners:
rpsM
Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.451
EKF06088.1
Leucine Rich repeat protein; KEGG: ddi:DDB_0191503 6.4e-83 pats1; hypothetical protein; K08843 leucine-rich repeat kinase 1; Psort location: Extracellular, score: 9.45.
    
  0.417
EKF05801.1
Hypothetical protein; KEGG: bcm:Bcenmc03_2681 0.97 recA; recombinase A K03553.
    
  0.417
EKF04592.1
Small GTP-binding protein; KEGG: blo:BL0738 1.4e-05 bifunctional cytidylate kinase/GTP-binding protein K03977.
    
  0.417
EKF05516.1
Hypothetical protein; KEGG: kcr:Kcr_0943 0.58 seryl-tRNA synthetase K01875.
    
  0.417
EKE97859.1
GTP-binding protein, Rab family; KEGG: dme:Dmel_CG7062 3.7e-19 Rab-RP3; Rab-related protein 3 K07976.
    
  0.417
EKE96716.1
Hypothetical protein; KEGG: ech:ECH_0732 0.40 aspartate aminotransferase K00812; Psort location: Cytoplasmic, score: 8.96.
    
  0.417
EKE96717.1
Hypothetical protein; KEGG: rsp:RSP_2569 0.71 sqdB; UDP-sulfoquinovose synthase K06118; Psort location: Cytoplasmic, score: 8.96.
    
  0.417
EKF02512.1
Hypothetical protein; KEGG: msi:Msm_0520 0.34 thymidylate kinase, Tmk K00943.
    
  0.417
EKF01598.1
Small GTP-binding protein; KEGG: cjk:jk0878 0.00083 cmk; bifunctional cytidylate kinase/GTP-binding protein K03977; Psort location: CytoplasmicMembrane, score: 9.86.
    
  0.417
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.