STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99146.1Fur family transcriptional regulator; KEGG: sbc:SbBS512_E4551 0.29 zur; zinc uptake transcriptional repressor K09823; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family. (148 aa)    
Predicted Functional Partners:
EKE97172.1
Putative transcriptional regulator; KEGG: ade:Adeh_3523 0.59 HflC protein; K04087 membrane protease subunit HflC.
 
    0.729
rpoA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.701
EKF06005.1
CoA binding domain protein; KEGG: cms:CMS_2340 7.0e-26 cysD; O-acetylhomoserine (thiol)-lyase.
  
    0.679
EKF00622.1
Fe2+/Zn2+ uptake regulation protein; KEGG: sbc:SbBS512_E4551 6.5e-06 zur; zinc uptake transcriptional repressor K09823; Belongs to the Fur family.
  
     0.672
EKF02682.1
Antioxidant, AhpC/TSA family; KEGG: npu:Npun_F6082 4.8e-104 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.668
EKF01660.1
Antioxidant, AhpC/TSA family; KEGG: ava:Ava_1358 3.0e-111 1-Cys peroxiredoxin K03386; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.668
rpoB
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.667
EKE98734.1
Ferric uptake regulator; KEGG: ecm:EcSMS35_4508 1.5e-06 zur; zinc uptake regulation protein K09823; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.
  
     0.650
rpoZ
DNA-directed RNA polymerase; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.599
rpoC1
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.527
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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