STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99159.1Peptidase, M23 family; KEGG: ava:Ava_2410 7.2e-94 peptidoglycan-binding LysM K08259; Psort location: OuterMembrane, score: 9.92. (252 aa)    
Predicted Functional Partners:
EKE99377.1
Peptidase, M23 family; KEGG: psp:PSPPH_0687 6.2e-10 M24/M37 family peptidase.
  
     0.747
EKF00372.1
KEGG: npu:Npun_R4647 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.698
EKE97480.1
KEGG: npu:Npun_F3870 0. 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.671
EKF05834.1
KEGG: npu:Npun_F3055 6.9e-295 1A family penicillin-binding protein K05366; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.666
EKE99867.1
Transglycosylase; KEGG: npu:Npun_R0887 0. FHA modulated glycosyl transferase/transpeptidase; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.666
EKF05336.1
Transglycosylase SLT domain protein; KEGG: npu:Npun_R5647 0. lytic transglycosylase, catalytic; K08309 soluble lytic murein transglycosylase.
 
   
 0.481
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 
   0.465
EKE99098.1
KEGG: ana:alr5101 0. pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.434
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.402
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily.
 
     0.401
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.