STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99166.1Oxidoreductase, 2OG-Fe(II) oxygenase family protein; KEGG: pmh:P9215_13741 0.015 piuC; putative hydroxylase; K07336 PKHD-type hydroxylase. (232 aa)    
Predicted Functional Partners:
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
    
 0.707
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.608
EKE96611.1
Hypothetical protein; KEGG: cpb:Cphamn1_0926 0.049 amine oxidase; K00231 protoporphyrinogen oxidase.
  
     0.579
EKF04473.1
Hypothetical protein; KEGG: deb:DehaBAV1_0857 0.13 prolipoprotein diacylglyceryl transferase; K00785 beta-galactosamide-alpha-2,3-sialyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.549
EKE96979.1
DMT superfamily drug/metabolite transporter; KEGG: pmi:PMT9312_1186 0.12 leader peptidase (prepilin peptidase) / N-methyltransferase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.544
EKF02327.1
Oxidoreductase, zinc-binding dehydrogenase family protein; KEGG: npu:Npun_F5608 9.4e-156 alcohol dehydrogenase K07119; Psort location: Cytoplasmic, score: 9.97.
    
   0.542
tuf
Elongation factor EF1A; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.528
EKF04544.1
Putative integrase; KEGG: rha:RHA1_ro08393 0.27 transposase; Psort location: Cytoplasmic, score: 8.96.
    
   0.528
EKE97288.1
Integrase core domain protein; KEGG: rha:RHA1_ro08393 0.14 transposase; Psort location: Cytoplasmic, score: 8.96.
    
   0.528
EKE97289.1
KEGG: vvi:100264087 0.53 hypothetical protein LOC100264087; K03841 fructose-1,6-bisphosphatase I; Psort location: Cytoplasmic, score: 8.96.
    
   0.528
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.