STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE99183.1Putative nuclease; KEGG: lbu:LBUL_2033 0.97 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 8.96. (206 aa)    
Predicted Functional Partners:
EKF06097.1
KEGG: ctc:CTC02329 0.072 hypothetical protein; K02121 V-type H+-transporting ATPase subunit E.
  
     0.753
EKF01770.1
Hypothetical protein; KEGG: plu:plu3953 0.67 nudF; ADP-ribose pyrophosphatase NudF K01515; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
EKE99219.1
Hypothetical protein; KEGG: tan:TA11140 0.64 Rab geranylgeranyltransferase; K05956 protein geranylgeranyltransferase type II; Psort location: Cytoplasmic, score: 8.96.
  
     0.715
EKE99804.1
Hypothetical protein; KEGG: kol:Kole_0037 0.38 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.705
EKF00233.1
Hypothetical protein; KEGG: pmj:P9211_02581 0.21 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435.
  
     0.682
EKE99053.1
Hypothetical protein; KEGG: cyn:Cyan7425_2208 7.5e-76 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
     0.650
EKF02462.1
Hypothetical protein; KEGG: cyn:Cyan7425_2208 8.8e-105 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial.
  
     0.628
EKE96663.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.590
EKF04642.1
Hypothetical protein; KEGG: ccv:CCV52592_1475 0.088 type I restriction-modification system, R subunit K01153.
  
     0.576
EKE99184.1
Hypothetical protein; KEGG: tdn:Suden_0438 0.71 truB; tRNA pseudouridine synthase B K03177.
       0.571
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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