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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE99234.1Hypothetical protein; KEGG: eba:ebA5193 0.068 ftsH; cell division protein FtsH-like protein K03798; Psort location: CytoplasmicMembrane, score: 9.46. (236 aa)    
Predicted Functional Partners:
EKE98990.1
SPFH domain / Band 7 family protein; KEGG: pen:PSEEN2689 1.3e-08 hypothetical protein; K04087 membrane protease subunit HflC; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.925
EKE99012.1
SPFH domain / Band 7 family protein; KEGG: reh:H16_A2768 5.3e-16 membrane-bound protease subunit; Psort location: Cytoplasmic, score: 8.96.
   
 0.925
EKE98817.1
SPFH domain / Band 7 family protein; KEGG: dma:DMR_27080 3.8e-15 hflC; putative HflC protein; K04087 membrane protease subunit HflC; Psort location: Cytoplasmic, score: 8.96.
   
 0.925
EKE97837.1
SPFH domain / Band 7 family protein; KEGG: swp:swp_0792 1.9e-15 HflC; K04087 membrane protease subunit HflC; Psort location: Cytoplasmic, score: 8.96.
   
 0.925
EKF00623.1
SPFH domain / Band 7 family protein; KEGG: reh:H16_A2036 1.4e-42 membrane protease subunits, stomatin/prohibitin homologs.
   
 0.925
EKE99750.1
SPFH domain / Band 7 family protein; KEGG: cja:CJA_3076 5.5e-12 hflC; HflC protein; K04087 membrane protease subunit HflC.
   
 0.925
EKE99334.1
HflC/HflK family protein; KEGG: reh:H16_A2036 1.6e-34 membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96.
   
 0.925
EKE99840.1
Ribosomal protein S1; KEGG: hor:Hore_10450 1.3e-34 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
 
   0.867
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
 
 
 0.866
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.862
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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