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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE96352.1Hypothetical protein; KEGG: rsd:TGRD_452 0.65 aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase. (133 aa)    
Predicted Functional Partners:
EKE97447.1
AMP-binding enzyme; KEGG: ava:Ava_1613 0. non-ribosomal peptide synthase.
   
 0.862
EKE96351.1
Putative relaxase; KEGG: edi:EDI_048910 0.017 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.773
EKE96353.1
Hypothetical protein.
       0.773
EKF01144.1
AMP-binding enzyme; KEGG: npu:Npun_F2181 0. amino acid adenylation domain-containing protein.
   
 0.752
EKF03163.1
KEGG: ava:Ava_1025 0. nitrate transport ATP-binding subunits C and D K11952; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.736
EKE99627.1
KEGG: ava:Ava_4542 0. nitrate transport ATP-binding subunits C and D K02049.
  
 
 0.736
EKF04553.1
KEGG: ava:Ava_C0007 0. condensation domain-containing protein.
  
 0.630
EKE99918.1
Putative taurine catabolism dioxygenase; KEGG: ava:Ava_C0007 3.4e-87 condensation domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.630
EKE99919.1
KEGG: npu:Npun_R3429 1.3e-156 condensation domain-containing protein; Psort location: Cytoplasmic, score: 9.97.
  
 0.630
EKE99927.1
AMP-binding enzyme; KEGG: npu:Npun_CR072 0. amino acid adenylation domain-containing protein.
  
 0.630
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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