STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE96375.1Integrase; KEGG: mes:Meso_2694 0.999 myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family. (324 aa)    
Predicted Functional Partners:
EKE96772.1
Integrase; KEGG: afe:Lferr_0826 0.72 Fe-S protein assembly chaperone HscA K04044; Psort location: Cytoplasmic, score: 9.97.
  
     0.751
EKE96812.1
Integrase; KEGG: rhi:NGR_c16590 0.23 folB; dihydroneopterin aldolase K01633; Psort location: Cytoplasmic, score: 9.97.
  
     0.749
rpsI
Ribosomal protein S9; KEGG: pmx:PERMA_1161 0.88 lon; ATP-dependent protease La K01338; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uS9 family.
    
 0.702
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
  0.696
rpsR
Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
    
 0.694
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
    
  0.690
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
  0.690
ruvB
DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
 
  
 0.687
EKE97248.1
Integrase; KEGG: mka:MK0899 0.992 ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
  
     0.654
EKF00938.1
Putative 5-methylcytosine; KEGG: eco:b4345 5.8e-07 mcrC, ECK4335, JW5789; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.627
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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