STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE96384.1KEGG: ckp:ckrop_0715 0.98 hypothetical protein; K02342 DNA polymerase III subunit epsilon. (131 aa)    
Predicted Functional Partners:
EKE96383.1
Ribonuclease; KEGG: rme:Rmet_2986 2.9e-06 guanine-specific ribonuclease N1 and T1; K01167 ribonuclease T1; Psort location: Cytoplasmic, score: 8.96.
       0.678
EKE96382.1
Hypothetical protein; KEGG: rpd:RPD_0481 0.995 succinate dehydrogenase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b-556 subunit.
       0.635
EKE96385.1
Peptidase families S8 and S53; KEGG: reh:H16_A1706 8.8e-40 S08A subfamily peptidase K01362; Psort location: Cytoplasmic, score: 9.97.
       0.631
EKE96381.1
Hypothetical protein; KEGG: sun:SUN_1813 0.11 tryptophan synthase subunit beta K06001.
       0.517
EKE96380.1
Hypothetical protein; KEGG: cgb:cg1457 0.997 dnaQ2; DNA polymerase III, epsilon subunit, putative; K02342 DNA polymerase III subunit epsilon.
       0.495
EKE96386.1
Hypothetical protein; KEGG: tbr:Tb927.8.8040 0.074 diadenosine tetraphosphatase K01525.
       0.414
EKF05874.1
Protein-glutamate methylesterase CheB; KEGG: ava:Ava_0314 4.3e-67 signal transduction histidine kinase (STHK) with CheB and CheR activity; K00575 chemotaxis protein methyltransferase CheR K00936:K03412; Psort location: Cytoplasmic, score: 9.26.
   
   0.404
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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