STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98690.1Hypothetical protein; KEGG: oaa:100081366 0.93 similar to histone deacetylase HD1; K06067 histone deacetylase 1/2. (46 aa)    
Predicted Functional Partners:
EKE98689.1
Hypothetical protein; KEGG: tbd:Tbd_2668 2.4e-19 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EKE98688.1
Hypothetical protein; KEGG: spu:574696 0.00074 similar to choline acetyltransferase; K00623 choline O-acetyltransferase.
       0.569
EKE98691.1
KEGG: cti:RALTA_A0343 2.0e-27 putative phosphoglycerate mutase/bisphosphoglycerate mutase.
       0.464
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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