STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98707.1Pyridoxal phosphate enzyme, YggS family; KEGG: edi:EDI_317140 6.1e-26 proline synthetase associated protein K06997; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (193 aa)    
Predicted Functional Partners:
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.929
EKF05895.1
Hypothetical protein; KEGG: hip:CGSHiEE_02405 2.2e-14 trmU; hypothetical protein K05810; Psort location: Cytoplasmic, score: 8.96; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
 0.847
EKF05645.1
Hypothetical protein; KEGG: cyt:cce_4485 1.8e-06 atpG; ATP synthase F0, B' subunit; K02109 F-type H+-transporting ATPase subunit b; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.837
murF
Putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
    0.744
rpmC
Ribosomal protein L29; KEGG: mgm:Mmc1_3676 0.066 ATP synthase F0, B subunit; K02109 F-type H+-transporting ATPase subunit b; Belongs to the universal ribosomal protein uL29 family.
   
    0.737
EKE98829.1
YGGT family protein; KEGG: cel:K11D2.2 0.64 asah-1; AcylSphingosine AmidoHydrolase; K12348 acid ceramidase; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.734
EKE97159.1
YGGT family protein; KEGG: cme:CMW007C 0.0067 cytochrome B; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit.
  
  
 0.734
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
    0.727
rpmJ
Ribosomal protein L36; KEGG: cag:Cagg_2818 0.94 deoxyribose-phosphate aldolase K01619; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL36 family.
  
    0.698
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
 
     0.667
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.