STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98867.1Putative family 28 glycosyl hydrolase; KEGG: csc:Csac_0361 9.5e-18 galacturan 1,4-alpha-galacturonidase K01213; Psort location: Extracellular, score: 9.72; Belongs to the glycosyl hydrolase 28 family. (642 aa)    
Predicted Functional Partners:
EKF03586.1
Glycosyl hydrolase family 10; KEGG: cyn:Cyan7425_1132 5.5e-96 endo-1,4-beta-xylanase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.654
EKF03624.1
Glycerophosphodiester phosphodiesterase family protein; KEGG: npu:Npun_R0171 8.2e-141 glycerophosphoryl diester phosphodiesterase K01126.
    
   0.642
EKE98865.1
Putative polysaccharide biosynthesis protein; KEGG: pfo:Pfl01_3841 0.00052 phosphoribosylaminoimidazole carboxylase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.640
EKE98866.1
Putative SAM-dependent methyltransferase; KEGG: sde:Sde_2150 4.5e-07 3-demethylubiquinone-9 3-methyltransferase K00568; Psort location: Cytoplasmic, score: 8.96.
       0.636
uxaC
KEGG: npu:Npun_F5333 6.8e-224 glucuronate isomerase HrmI K01812; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.585
EKF03959.1
KEGG: sgo:SGO_0288 2.9e-19 GDSL-like lipase/acylhydrolase K01062.
 
 
 
 0.584
EKF02822.1
KEGG: sgo:SGO_0288 7.5e-16 GDSL-like lipase/acylhydrolase K01062.
 
 
 
 0.570
EKE96849.1
KEGG: npu:Npun_F2718 1.4e-83 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625; Psort location: Cytoplasmic, score: 9.26.
 
   
 0.554
EKE98864.1
Hypothetical protein; KEGG: cpo:COPRO5265_1241 0.41 gltA; glutamate synthase (NADPH), homotetrameric K00266.
       0.536
EKE98869.1
Hypothetical protein; KEGG: ypk:y0372 0.30 wecF; putative common antigen polymerase; K02853 4-alpha-L-fucosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.532
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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