STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98872.1Bacterial sugar transferase; KEGG: tro:trd_A0816 3.0e-49 undecaprenyl-phosphate glucose phosphotransferase; Psort location: CytoplasmicMembrane, score: 10.00. (245 aa)    
Predicted Functional Partners:
EKE98880.1
Lipopolysaccharide biosynthesis protein; KEGG: cyn:Cyan7425_1127 1.8e-161 capsular exopolysaccharide family; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.842
EKF04789.1
Exopolysaccharide biosynthesis protein; KEGG: cyn:Cyan7425_1087 1.0e-124 capsular exopolysaccharide family.
 
  
 0.830
EKF00465.1
KEGG: ava:Ava_1045 3.7e-145 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.822
EKF03588.1
Glycosyl transferase, WecB/TagA/CpsF family; KEGG: swo:Swol_2372 7.8e-49 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase K05946; Belongs to the glycosyltransferase 26 family.
    
 0.821
EKF03585.1
KEGG: ava:Ava_4846 1.1e-221 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.819
EKF00557.1
Chain length determinant protein; KEGG: ava:Ava_0852 2.9e-145 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.813
EKF03055.1
Putative lipopolysaccharide biosynthesis protein; KEGG: ava:Ava_2661 3.9e-205 hypothetical protein K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.807
EKE98406.1
KEGG: ava:Ava_1116 1.4e-294 lipopolysaccharide biosynthesis K00903; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.806
EKF04893.1
Putative protein-tyrosine kinase; KEGG: cyn:Cyan7425_2153 1.4e-129 capsular exopolysaccharide family.
 
  
 0.787
EKF01431.1
KEGG: ava:Ava_2908 4.7e-280 lipopolysaccharide biosynthesis K00903.
 
  
 0.753
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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