STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98790.1Putative DNA repair protein; KEGG: edi:EDI_048910 5.6e-12 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96. (690 aa)    
Predicted Functional Partners:
sbcD
DNA repair exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
 0.933
EKF05420.1
Putative metallophosphoesterase; KEGG: bba:Bd2508 0.073 phosphoesterase K01175; Psort location: Cytoplasmic, score: 8.96.
  
 0.933
EKF01140.1
Ser/Thr protein phosphatase family protein; KEGG: ava:Ava_1170 0.00014 metallophosphoesterase K01078; Psort location: Cytoplasmic, score: 8.96.
  
 0.933
EKE99852.1
Metallophosphoesterase; KEGG: tbr:Tb927.8.8040 0.094 diadenosine tetraphosphatase K01525.
  
 0.933
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.908
EKE98788.1
typeIII site-specific deoxyribonuclease; KEGG: fth:FTH_0160 2.5e-09 DNA/RNA helicase K01529; Psort location: Cytoplasmic, score: 8.96.
 
    0.866
EKE98793.1
Hypothetical protein; KEGG: nam:NAMH_1387 0.65 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) K04075.
 
     0.840
EKE98789.1
Hypothetical protein; KEGG: nha:Nham_3693 0.39 def; peptide deformylase K01462.
       0.808
EKF01818.1
DNA sulfur modification protein DndE; KEGG: osa:4327345 0.59 Os01g0199900; hypothetical protein; K11808 phosphoribosylaminoimidazole carboxylase.
 
   
 0.804
EKF00393.1
KEGG: npu:Npun_R3585 0. ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ; Psort location: Cytoplasmic, score: 9.97.
   
 0.803
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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