STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98508.1Oxidoreductase, FAD/FMN-binding protein; KEGG: ava:Ava_4435 1.5e-166 flavin oxidoreductase/NADH oxidase; Psort location: Cytoplasmic, score: 8.96. (355 aa)    
Predicted Functional Partners:
EKE96619.1
Ribosomal protein S1; KEGG: fal:FRAAL1781 2.5e-45 rpsA; 30S ribosomal protein S1 K02945; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.644
EKE99840.1
Ribosomal protein S1; KEGG: hor:Hore_10450 1.3e-34 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
   
  
 0.644
tuf
Elongation factor EF1A; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.610
EKF04544.1
Putative integrase; KEGG: rha:RHA1_ro08393 0.27 transposase; Psort location: Cytoplasmic, score: 8.96.
   
    0.610
EKE97288.1
Integrase core domain protein; KEGG: rha:RHA1_ro08393 0.14 transposase; Psort location: Cytoplasmic, score: 8.96.
   
    0.610
EKE97289.1
KEGG: vvi:100264087 0.53 hypothetical protein LOC100264087; K03841 fructose-1,6-bisphosphatase I; Psort location: Cytoplasmic, score: 8.96.
   
    0.610
EKE97765.1
Hypothetical protein; KEGG: bra:BRADO3863 0.00013 putative gluconolactonase K01053.
     
 0.602
EKF03541.1
KEGG: npu:Npun_R5588 4.1e-194 IMP dehydrogenase family protein K00088; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.452
EKE98552.1
KEGG: ava:Ava_0316 0. peptidase M1, membrane alanine aminopeptidase K01256; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.405
EKE98633.1
Hypothetical protein; KEGG: cyb:CYB_0241 4.1e-19 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K00001 alcohol dehydrogenase K04072.
     
 0.404
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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