STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98524.1Serine-type D-Ala-D-Ala protein; KEGG: amr:AM1_3751 1.8e-51 dacB; D-alanyl-D-alanine carboxypeptidase, putative; K07260 D-alanyl-D-alanine carboxypeptidase; Psort location: CytoplasmicMembrane, score: 8.46. (270 aa)    
Predicted Functional Partners:
EKE98523.1
Kinase domain protein; KEGG: cyc:PCC7424_2928 1.4e-120 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
EKE98522.1
KEGG: tet:TTHERM_00031810 9.6e-33 ABC transporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.565
ddl
D-ala D-ala ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
   
 0.411
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.