STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98437.1Hypothetical protein; KEGG: pic:PICST_84338 0.38 DEG1; pseudouridine synthase K01718; Psort location: CytoplasmicMembrane, score: 9.27. (236 aa)    
Predicted Functional Partners:
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.929
EKF01800.1
KEGG: mgr:MGG_01257 0.014 hypothetical protein; K05545 tRNA-dihydrouridine synthase 4; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.775
EKE98438.1
Hypothetical protein; KEGG: mar:MAE_59890 0.0017 gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A.
       0.773
EKE97157.1
Ycf66 protein; KEGG: sye:Syncc9902_1304 3.1e-06 RNA methyltransferase TrmH, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: OuterMembrane, score: 9.49.
  
     0.773
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.756
EKF03108.1
Hypothetical protein; KEGG: shm:Shewmr7_0171 0.016 delta-9 acyl-phospholipid desaturase K00507; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.742
EKF03762.1
Hypothetical protein; KEGG: mxa:MXAN_4731 0.65 lysS; lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 8.96.
  
     0.702
EKF04120.1
Hypothetical protein; KEGG: bha:BH2004 7.4e-06 gentisate 1,2-dioxygenase; K00450 gentisate 1,2-dioxygenase.
 
     0.695
EKF02706.1
TspO/MBR family protein; KEGG: gsu:GSU0142 0.27 pgpA; phosphatidylglycerophosphatase A K01095; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.682
EKE98432.1
Putative methyl-accepting chemotaxis protein; KEGG: nfa:nfa52800 0.56 pssA; putative phosphatidylserine synthase; K00998 phosphatidylserine synthase.
  
     0.680
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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