STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKE98398.1Hypothetical protein; KEGG: bfs:BF0184 9.4e-08 putative lipopolysaccharide 1,2-glucosyltransferase/general stress protein K05945. (115 aa)    
Predicted Functional Partners:
EKE98397.1
Hypothetical protein; KEGG: ckp:ckrop_1345 0.27 holA; DNA polymerase III delta subunit K02340.
       0.550
EKE98399.1
KEGG: npu:Npun_R1078 4.0e-164 NAD-dependent epimerase/dehydratase; Psort location: Cytoplasmic, score: 8.96.
       0.532
EKE96874.1
General stress protein; KEGG: swd:Swoo_2060 0.00038 pyridoxamine 5'-phosphate oxidase K00275.
   
    0.515
EKE99921.1
KEGG: npu:Npun_R3430 0. beta-ketoacyl synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.416
EKF02039.1
Hypothetical protein; KEGG: dmo:Dmoj_GI21653 0.00028 GI21653 gene product from transcript GI21653-RA; K03163 DNA topoisomerase I.
   
  
 0.415
EKF00567.1
KEGG: ava:Ava_2888 1.2e-116 short-chain dehydrogenase/reductase SDR K05886; Psort location: Cytoplasmic, score: 9.97; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.405
EKE99961.1
NAD-binding domain 4; KEGG: npu:Npun_R3707 1.7e-94 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.405
EKF03477.1
Putative amidinotransferase; KEGG: hma:rrnAC0132 2.7e-87 lysine-ketoglutarate reductase/saccharopine dehydrogenase K00293; Psort location: Cytoplasmic, score: 8.96.
   
    0.404
Your Current Organism:
Tolypothrix sp. PCC7601
NCBI taxonomy Id: 1188
Other names: Calothrix sp. PCC 7601, Fremyella diplosiphon ACMM 396, Fremyella diplosiphon IAM M-100, Fremyella diplosiphon UTEX B 481, Microchaete diplosiphon UTEX B 481, T. sp. PCC 7601, Tolypothrix (Calothrix) sp. PCC 7601, Tolypothrix sp. PCC 7601, Tolypothrix sp. PCC 7601 = UTEX B 481
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